| IATA | ICAO | Name | City | Type |
|---|---|---|---|---|
| - | JP-1314 | Aizawa Hospital Heliport | Matsumoto | Heliport |
| - | JP-3213 | Akadake Kosen Heliport | Chino | Heliport |
| - | JP-2445 | Amikake Tunnel East Entrance Helipad | Achi | Heliport |
| - | JP-2651 | Aokimura Furusato Park Heliport | Aoki | Heliport |
| - | JP-3541 | ARIAir Iida City Temporary Heliport | Iida | Heliport |
| - | JP-3257 | Ariake Heliport | Azumino | Heliport |
| - | JP-3579 | Club F Iida Heliport | Iida | Heliport |
| - | JP-2646 | FANUC Heliport | Chino | Heliport |
| - | JP-2092 | Geijutsu-mura Park Emergency Helipad | Tomi | Heliport |
| - | JP-2652 | Hanka Heliport | Ueda | Heliport |
| - | JP-2664 | Happusan Tunnel Heliport | Saku | Heliport |
| - | JP-2538 | Haraizawa Heliport | Hara | Heliport |
| - | JP-2218 | Hasegawa Airfield | Matsumoto | Closed Airport |
| - | JP-1306 | Higashisawa Heliport | Omachi | Heliport |
| - | JP-2305 | Hodono Helipad | Iida | Heliport |
| - | JP-2587 | Iida Interchange Heliport | Iida | Heliport |
| - | JP-1319 | Iida Municipal Hospital Heliport | Iida | Heliport |
| - | JP-2588 | Iida Sports Park Heliport | Iida | Heliport |
| - | JP-1307 | Ikeda Heliport | Ikeda | Heliport |
| - | JP-3254 | Ikusaka (Uruga) Heliport | Ikusaka | Heliport |
| - | JP-2549 | Ina Airfield | Ina | Closed Airport |
| - | JP-1317 | Ina Central Hospital Helipad | Ina | Heliport |
| - | JP-2550 | Ina Interchange Heliport | Ina | Heliport |
| - | JP-1309 | JA Nagano Koseiren Saku General Hospital and Medical Center Heliport | Saku | Heliport |
| - | JP-1311 | Japan Red Cross Nagano Hospital Heliport | Nagano | Heliport |
| - | JP-2577 | Japan Red Cross Suwa Hospital Heliport | Suwa | Heliport |
| - | JP-2219 | JGSDF Camp Matsumoto Heliport | Matsumoto | Heliport |
| - | JP-3255 | Jonengoya Heliport | Matsumoto | Heliport |
| - | JP-3391 | Kamiwago Heliport | Anan | Heliport |
| - | JP-2638 | Kannonyama Heliport | Tenryu | Heliport |
| - | JP-3359 | Kansai Power Takikoshi Heliport | Otaki | Heliport |
| - | JP-3211 | Karasawa Heliport | Nagawa | Heliport |
| - | JP-2658 | Karuizawa Fire Department Heliport | Karuizawa | Heliport |
| - | JP-0666 | Kasagatake Heliport | Takayama | Heliport |
| - | JP-0471 | Kirigamine Gliderport | Suwa | Small Airport |
| - | JP-3210 | Kitatateshina Heliport | Saku | Heliport |
| - | JP-2782 | Koshibu Dam Heliport | Matsukawa | Heliport |
| - | JP-2580 | Makio Dam Heliport | Otaki | Heliport |
| - | JP-2091 | Matsumoto Heliport | Matsumoto | Heliport |
| - | JP-2581 | Miura Dam Heliport | Otaki | Heliport |
| - | JP-2115 | Nagano Airfield | Nagano | Closed Airport |
| - | JP-1313 | Nagano Children's Hospital Heliport | Azumino | Heliport |
| - | JP-0470 | Nagano City Gliderport | Nagano | Small Airport |
| - | JP-0499 | Nagano Heliport | Nagano | Heliport |
| - | JP-2656 | Nagano Interchange Heliport | Nagano | Heliport |
| - | JP-1312 | Nagano Matsushiro General Hospital Helipad | Nagano | Heliport |
| - | JP-1310 | Nagano Municipal Hospital Helipad | Nagano | Heliport |
| - | JP-2444 | Nagano Prefectural Anan Hospital Heliport | Anan | Heliport |
| - | JP-1318 | Nagano Prefectural Kiso Hospital Heliport | Kiso | Heliport |
| - | JP-2655 | Nagano Prefecture Fire Academy Heliport | Nagano | Heliport |
| - | JP-2578 | Nagano Prefecture Saku Joint Government Building Helipad | Saku | Heliport |
| - | JP-2586 | Namerikawa Heliport | Agematsu | Heliport |
| - | JP-3015 | Nisenji Heliport | Tenryu | Heliport |
| - | JP-3253 | Ogurayama Paraglider Launch | Omachi | Small Airport |
| - | JP-2575 | Okawara Helipad | Oshika | Heliport |
| - | JP-2962 | Okusa Castle Park Helipad | Nakagawa | Heliport |
| - | JP-2654 | Omi Heliport | Omi | Heliport |
| - | JP-2576 | Oshika Heliport | Oshika | Heliport |
| - | JP-2579 | Saku General Hospital Heliport | Saku | Heliport |
| - | JP-2663 | Saku General Hospital Koumi Branch Heliport | Koumi | Heliport |
| - | JP-2660 | Seibu Karuizawa Heliport | Karuizawa | Heliport |
| - | JP-2650 | Shimosuwa Heliport | Shimosuwa | Heliport |
| - | JP-3021 | Shinnoshobo Emergency Heliport | Anan | Heliport |
| MMJ | RJAF | Shinshu-Matsumoto Airport | Matsumoto | Medium Airport Scheduled |
| - | JP-1315 | Shinshu University Hospital Heliport | Matsumoto | Heliport |
| - | JP-2662 | Shobu-an Heliport | Komoro | Heliport |
| - | JP-1316 | Showa Inan General Hospital Heliport | Komagane | Heliport |
| - | JP-2542 | Suwa Central Hospital Heliport | Chino | Heliport |
| - | JP-2551 | Suwa Interchange Heliport | Nakasu | Heliport |
| - | JP-3209 | Tateshina Tokyu Resort Heliport | Chino | Heliport |
| - | JP-2307 | Tenryu Heliport | Tenryu | Heliport |
| - | JP-3014 | Tomikusa Heliport | Anan | Heliport |
| - | JP-0212 | Toyama Emergency Helipad | Iida | Heliport |
| - | JP-2647 | Toyota Tateshina Heliport | Chino | Heliport |
| - | JP-3212 | Tsuetsuki Pass Heliport | Suwa | Heliport |
| - | JP-2653 | Ueda Airfield | Ueda | Closed Airport |
| - | JP-3018 | Uenotaira Heliport | Hiraya | Heliport |
| - | JP-3385 | Uminokuchi Heliport | Minamimaki | Closed Airport |
| - | JP-3390 | Urugi Heliport | Urugi | Heliport |
| - | JP-2306 | Yaegouchi Heliport | Iida | Heliport |
| - | JP-2649 | Yatsugatake Gyoja-goya Heliport | Chino | Heliport |
| - | JP-2648 | Yatsugatake-kogen Heliport | Minamimaki | Heliport |