| IATA | ICAO | Name | City | Type |
|---|---|---|---|---|
| - | PY-0042 | Aeródromo de Cabaña La Escondida | Cabaña La Escondida | Small Airport |
| - | PY-0039 | Aeródromo de la Estancia Buena Vista | Estancia Buena Vista | Small Airport |
| - | PY-0040 | Aeródromo de San Miguel | San Miguel | Small Airport |
| - | PY-0041 | Aeródromo de Santa María Misiones | Santa Maria | Small Airport |
| - | PY-0082 | Base de la Fuerza Aérea Paraguaya "Ayolas" | - | Small Airport |
| - | PY-0081 | Base de la Fuerza Aérea Paraguaya "Yacyretá" | - | Small Airport |
| AYO | SGAY | Juan de Ayolas National Airport | Ayolas | Medium Airport |
| - | PY-0038 | San Juan Bautista National Airport | San Juan Bautista | Small Airport |