| IATA | ICAO | Name | City | Type |
|---|---|---|---|---|
| AOP | SPAS | Alferez FAP Alfredo Vladimir Sara Bauer Airport | Andoas | Small Airport |
| - | SPBS | Bellavista Airport | Jeberos | Small Airport |
| - | SPBC | Caballococha Airport | Caballococha | Medium Airport |
| - | PE-0003 | Cabo Pantoja Airstrip | Cabo Pantoja | Small Airport |
| - | SPDN | Colonia Angamos Airport | Colonia Angamos | Small Airport |
| - | SPCM | Contamana Airport | Contamana | Small Airport |
| IQT | SPQT | Coronel FAP Francisco Secada Vignetta International Airport | Iquitos | Medium Airport Scheduled |
| - | SPEE | El Estrecho Airport | - | Small Airport |
| - | SPGP | Güeppi Airport | - | Small Airport |
| - | SPNT | Intuto Airport | Intuto | Small Airport |
| - | PE-0001 | Lagunas Airstrip | Lagunas | Small Airport |
| YMS | SPMS | Moises Benzaquen Rengifo Airport | Yurimaguas | Medium Airport Scheduled |
| - | SPTA | Nauta Airport | Nauta | Small Airport |
| - | SPON | Orellana Airport | Orellana | Small Airport |
| - | SPPH | Pampa Hermosa Airport | Pampa Hermosa | Small Airport |
| - | SPEB | Pebas Airport | Loreto | Small Airport |
| - | PE-0040 | Requena Airport | Requena | Closed Airport |
| - | PE-0009 | San Lorenzo Airport | San Lorenzo | Small Airport |
| - | PE-0008 | Saramuro Airport | Saramuro | Small Airport |
| - | PE-0002 | Teniente Bergerie Airport | Iquitos | Small Airport |
| TDP | SPDR | Trompeteros Airport | Corrientes | Small Airport |