| Name | Type | IATA | ICAO | City |
|---|---|---|---|---|
| Bolaang Mongondow Airport | Small Airport Scheduled | LKM | WAMI |
Lolak |
| Kota Mobagu/Mopait Airport | Small Airport | BJG | ID-0343 |
Kota Mobagu |
| Melangguane Airport | Small Airport | MNA | WAMN |
Karakelong Island |
| Miangas Airport | Small Airport | IAX | WAMS |
Miangas |
| Naha Airport | Medium Airport Scheduled | NAH | WAMH |
Tabukan Utara, Sangihe Islands |
| Sam Ratulangi Airport | Medium Airport Scheduled | MDC | WAMM |
Manado |
| Siau/Sitaro Airport | Small Airport | BRG | WAMO |
Balirangen |
| Tahuna Heliport | Heliport | - | ID-0132 |
Tahuna |