| IATA | ICAO | Name | City | Type |
|---|---|---|---|---|
| BBA | SCBA | Balmaceda Airport | Balmaceda | Medium Airport Scheduled |
| WPA | SCAS | Cabo Juan Román Airfield | Puerto Aysén | Small Airport |
| - | SCBC | Cacique Blanco Airport | Lago Verde | Small Airport |
| - | SCIH | Caleta Andrade Airport | Caleta Andrade | Small Airport |
| CCH | SCCC | Chile Chico Airport | Chile Chico | Medium Airport |
| LGR | SCHR | Cochrane Airport | Cochrane | Medium Airport |
| - | SHCY | Coyhaique Regional Hospital Heliport | Coyhaique | Heliport |
| - | SCCR | Enrique Mayer Soto Airport | Caleta Tortel | Small Airport |
| - | SCEB | Entrada Baker Airport | Entrada Baker | Small Airport |
| - | SCEY | Entrada Mayer Airport | Entrada Mayer | Small Airport |
| - | SCRE | Estancia Río Cisnes Airport | Rio Cisnes | Small Airport |
| - | SCFC | Fachinal Airport | Fachinal | Small Airport |
| - | SCBR | Lago Brown Airport | Lago Brown | Small Airport |
| - | SHPM | Lago La Paloma Heliport | Coyahique | Heliport |
| - | SCVS | Lago Vargas Airport | Cochrane | Small Airport |
| - | SCVE | Lago Verde Airport | Lago Verde | Small Airport |
| - | SCIO | Laguna Redonda Airport | Villa O'Higgins | Small Airport |
| - | SCRF | Laguna San Rafael Airport | Laguna San Rafael | Small Airport |
| - | SCLJ | La Junta Airport | La Junta | Small Airport |
| - | SCLO | Leones Airport | Chile Chico | Small Airport |
| - | SCOO | Melimoyu Airport | Cisnes | Small Airport |
| - | SCMK | Melinka Airport | Melinka | Small Airport |
| - | CL-0032 | Meseta Cosmelli Airport | Puerto Guadal | Small Airport |
| - | SCND | Ñadis Airport | Ñadis | Small Airport |
| - | SCPK | Puerto Cisnes Airport | Puerto Cisnes | Small Airport |
| - | SCII | Puerto Ingeniero Ibañez Airport | Puerto Ingeniero Ibañez | Small Airport |
| - | SCMA | Puerto Marín Balmaceda Airport | Puerto Marin Balmaceda | Small Airport |
| - | SCSZ | Puerto Sanchéz Airport | Puerto Sanchez | Small Airport |
| - | SCHH | Punta Baja Airport | Chile Chico | Small Airport |
| - | SCPH | Puyuhuapi Airport | Puyuhuapi | Small Airport |
| - | SCQO | Quitralco Airport | Aysén | Small Airport |
| - | SCRB | Río Bravo Airport | Tortel | Small Airport |
| - | SCEX | Río Exploradores Airport | Aysén | Small Airport |
| - | SCRU | Río Murta Airport | Rio Murta | Small Airport |
| - | SCTP | Río Pascua Airport | Tortel | Small Airport |
| GXQ | SCCY | Teniente Vidal Airport | Coyhaique | Medium Airport |
| - | SCAL | Valchac Airport | Cochrane | Small Airport |
| - | SCNL | Villa Cerro Castillo Airport | Villa Cerro Castillo | Small Airport |
| - | SCOH | Villa O'Higgins Airport | Villa O'Higgins | Small Airport |
| - | SCRC | Villa Tapera Airport | Rio Cisnes | Small Airport |