| Name | Type | IATA | ICAO | City |
|---|---|---|---|---|
| Yonago Kitaro Airport / JASDF Miho Air Base | Medium Airport Scheduled | YGJ | RJOH |
Yonago |
| Yonaguni Airport | Medium Airport Scheduled | OGN | ROYN |
Yonaguni |
| Yonaza Airstrip | Closed Airport | - | JP-1371 |
Sagae |
| Yone Airfield | Closed Airport | - | JP-1985 |
Tomigusuku |
| Yonezawa Heliport | Heliport | - | JP-2402 |
Yonezawa |
| Yoron Airport | Medium Airport Scheduled | RNJ | RORY |
Yoron |
| Yoroshima Heliport | Heliport | - | JP-1141 |
Setouchi |
| Yoshida Torikata Multipurpose Park Heliport | Heliport | - | JP-2604 |
Chichibu |
| Yoshida Town Flood Control Center Heliport | Heliport | - | JP-3508 |
Yoshida |
| Yoshiigawa Eku Gliderport | Small Airport | - | JP-1904 |
Setouchi |
| Yoshijima Airfield | Closed Airport | - | JP-1803 |
Hiroshima |
| Yoshima Helipad | Heliport | - | JP-0081 |
Yoshima |
| Yoshima Heliport | Heliport | - | JP-2295 |
Sakaide |
| Yoshino Airfield | Closed Airport | - | JP-1048 |
Urahoro |
| Yoshino Heliport | Heliport | - | JP-3041 |
Shintotsukawa |
| Yoshino Heliport | Heliport | - | JP-0425 |
Higashiyoshino |
| Yoshioka Airfield | Closed Airport | - | JP-2167 |
Kakegawa |
| Yotsudanbara Airfield | Closed Airport | - | JP-2546 |
Kurihara |
| Yotsugoya Gliderport | Closed Airport | - | JP-2678 |
Akita |
| Yuai Memorial Hospital Heliport | Heliport | - | JP-3456 |
Koga |
| Yuge Heliport | Heliport | - | JP-2635 |
Kamijima |
| Yugimachi First Aid Helipad | Heliport | - | JP-0986 |
Ome |
| Yuhikoku Kawajima Airstrip | Small Airport | - | JP-0397 |
Kawajima |
| Yuhikoku Kawajima Helipad | Heliport | - | JP-0396 |
Kawajima |
| Yukiata Ground Helipad | Heliport | - | JP-0890 |
Muroto |
| Yuki Heliport | Heliport | - | JP-1161 |
Yuki |
| Yumachi Airstrip | Closed Airport | - | JP-1796 |
Matsue |
| Yumemi-no-machi Building Heliport | Heliport | - | JP-3475 |
Urayasu |
| Yuminokimoto Heliport | Heliport | - | JP-2443 |
Shinshiro |
| Yumura Hot Springs Heliport | Heliport | - | JP-2380 |
Shinonsen |
| Yura Army Airfield | Closed Airport | - | JP-0418 |
Minamiawaji |
| Yura Emergency Helipad | Heliport | - | JP-2338 |
Yura |
| Yurakucho Itocia Helipad | Heliport | - | JP-1743 |
Chiyoda, Tokyo |
| Yuri Airstrip | Small Airport | - | JP-1226 |
Yurihonjo |
| Yushima DC Helipad | Heliport | - | JP-1640 |
Bunkyo, Tokyo |
| Yusuhara Heliport | Heliport | - | JP-0801 |
Yusuhara |
| Yuzawa Interchange Heliport | Heliport | - | JP-3016 |
Yuzawa |
| Yuzukami Airfield | Closed Airport | - | JP-2513 |
Otawara |
| Zamami Heliport | Heliport | - | JP-1146 |
Zamami |
| Zanpa / Bolo Airfield | Closed Airport | - | JP-1993 |
Yomitan |
| Zenkoku Choson Kaikan (National Town Hall) Helipad | Heliport | - | JP-1118 |
Chiyoda, Tokyo |
| Zenshinkai Hospital Heliport | Heliport | - | JP-3046 |
Hagi |
| ZENT Maeda Heliport | Heliport | - | JP-2224 |
Toyota |
| Zukeran Airfield | Closed Airport | - | JP-1988 |
Chatan |